Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
MCP_1808Conserved hypothetical protein; Contains one Radical SAM domain (IPR007197); Similar to Pyruvate formate lyase activating protein homologue in Thermococcus litoralis (Q56302). (344 aa)    
Predicted Functional Partners:
MCP_1807
Conserved hypothetical protein.
       0.618
MCP_1516
Archaeosine tRNA-ribosyltransferase.
       0.516
MCP_1806
Conserved hypothetical protein; Contains one Zinc finger, SWIM-type domain (IPR007527).
       0.492
MCP_1809
Putative histidine kinase; Contains five PAS domains (IPR000014); Contains five PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains five PAC motif repeats (IPR001610).
       0.466
nrdG
Putative anaerobic ribonucleoside-triphosphate reductase-activating protein.
     
 0.453
lon
ATP-dependent protease La; Belongs to the peptidase S16 family.
       0.449
MCP_1919
L-lysine 2,3-aminomutase.
      
 0.447
MCP_0624
Conserved hypothetical protein; Contains one Radical SAM domain (IPR007197).
     
 0.411
MCP_0064
Putative ATP-dependent helicase.
       0.406
MCP_1804
Putative cation transporter.
       0.404
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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