STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1905Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (526 aa)    
Predicted Functional Partners:
MCP_2360
Aldehyde dehydrogenase.
  
  
 0.753
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis. Belongs to the purine/pyrimidine phosphoribosyltransferase family. Archaeal HPRT subfamily.
  
  
 0.664
lldP
Putative L-lactate permease.
  
  
 0.617
acsA
acetyl-CoA synthetase.
 
  
 0.605
MCP_0935
Putative acyl-CoA synthetase.
 
  
 0.603
MCP_2744
Putative amino acid ABC transporter ATP binding protein.
  
  
 0.583
MCP_2742
Putative amino acid ABC transporter amino acid binding protein.
 
 
 0.484
MCP_1191
Conserved hypothetical protein; Contains two Amino acid-binding ACT domains (IPR002912).
 
     0.473
MCP_0737
Putative sodium:amino acid symporter.
  
  
 0.449
MCP_2513
Aspartate kinase; Belongs to the aspartokinase family.
     
 0.414
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.