STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lldPPutative L-lactate permease. (530 aa)    
Predicted Functional Partners:
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.930
MCP_1907
Carboxylyase.
       0.678
MCP_0281
Putative FAD linked oxidase.
 
  
 0.666
MCP_1905
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.617
MCP_0989
Glutamate synthase.
     
 0.555
hdrD-1
Putative CoB--CoM heterodisulfide reductase iron-sulfur subunit D.
  
  
 0.551
hdrD-2
Putative CoB--CoM heterodisulfide reductase iron-sulfur subunit D.
  
  
 0.551
MCP_2315
Conserved hypothetical protein; Contains at least one Cysteine-rich region, CCG domain (IPR004017).
  
  
 0.551
MCP_1139
Putative glycerol-3-phosphate dehydrogenase.
 
   
 0.525
MCP_2360
Aldehyde dehydrogenase.
  
  
 0.513
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.