STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2031Conserved hypothetical protein; Contains at least PBS lyase HEAT-like repeat (IPR004155). (674 aa)    
Predicted Functional Partners:
aif5A
Translation initiation factor 5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
  
 0.780
MCP_2391
Hypothetical protein; Contains two PBS lyase HEAT-like repeats (IPR004155).
 
     0.703
MCP_0360
Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155).
 
     0.701
MCP_2922
Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155).
  
     0.698
MCP_1681
Hypothetical protein; Contains at least two PBS lyase HEAT-like repeats (IPR004155).
  
     0.696
MCP_2755
Hypothetical protein; Contains at least one PBS lyase HEAT-like repeatrepeat (IPR004155).
  
     0.696
MCP_1142
Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155).
  
     0.695
MCP_1395
Hypothetical protein.
 
     0.612
MCP_2032
Hypothetical protein.
       0.592
MCP_0982
Conserved hypothetical protein.
 
  
 0.575
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.