Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_2065 | MCP_2066 | MCP_2065 | MCP_2066 | Belongs to the Uncharacterised conserved protein UCP015877, zinc finger family (IPR012041). | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF371 family (IPR007171). | 0.681 |
MCP_2065 | MCP_2067 | MCP_2065 | MCP_2067 | Belongs to the Uncharacterised conserved protein UCP015877, zinc finger family (IPR012041). | Conserved hypothetical protein. | 0.560 |
MCP_2065 | pcm | MCP_2065 | MCP_2064 | Belongs to the Uncharacterised conserved protein UCP015877, zinc finger family (IPR012041). | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.679 |
MCP_2066 | MCP_2065 | MCP_2066 | MCP_2065 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF371 family (IPR007171). | Belongs to the Uncharacterised conserved protein UCP015877, zinc finger family (IPR012041). | 0.681 |
MCP_2066 | MCP_2067 | MCP_2066 | MCP_2067 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF371 family (IPR007171). | Conserved hypothetical protein. | 0.773 |
MCP_2066 | pcm | MCP_2066 | MCP_2064 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF371 family (IPR007171). | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.545 |
MCP_2067 | MCP_2065 | MCP_2067 | MCP_2065 | Conserved hypothetical protein. | Belongs to the Uncharacterised conserved protein UCP015877, zinc finger family (IPR012041). | 0.560 |
MCP_2067 | MCP_2066 | MCP_2067 | MCP_2066 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF371 family (IPR007171). | 0.773 |
MCP_2067 | pcm | MCP_2067 | MCP_2064 | Conserved hypothetical protein. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.461 |
pcm | MCP_2065 | MCP_2064 | MCP_2065 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Belongs to the Uncharacterised conserved protein UCP015877, zinc finger family (IPR012041). | 0.679 |
pcm | MCP_2066 | MCP_2064 | MCP_2066 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF371 family (IPR007171). | 0.545 |
pcm | MCP_2067 | MCP_2064 | MCP_2067 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Conserved hypothetical protein. | 0.461 |