Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCP_0765 | MCP_1262 | Putative oxidoreductase. | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.544 |
MCP_0765 | MCP_1345 | Putative oxidoreductase. | Putative carbohydrate kinase. | 0.413 |
MCP_0765 | MCP_2072 | Putative oxidoreductase. | Conserved hypothetical protein; Contains one Xylose isomerase-like TIM barrel domain (IPR012307). | 0.540 |
MCP_0765 | MCP_2372 | Putative oxidoreductase. | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.545 |
MCP_0852 | MCP_1262 | Putative oxidoreductase. | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.546 |
MCP_0852 | MCP_1345 | Putative oxidoreductase. | Putative carbohydrate kinase. | 0.413 |
MCP_0852 | MCP_2072 | Putative oxidoreductase. | Conserved hypothetical protein; Contains one Xylose isomerase-like TIM barrel domain (IPR012307). | 0.540 |
MCP_0852 | MCP_2372 | Putative oxidoreductase. | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.548 |
MCP_0895 | MCP_1262 | Putative oxidoreductase. | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.546 |
MCP_0895 | MCP_1345 | Putative oxidoreductase. | Putative carbohydrate kinase. | 0.413 |
MCP_0895 | MCP_2072 | Putative oxidoreductase. | Conserved hypothetical protein; Contains one Xylose isomerase-like TIM barrel domain (IPR012307). | 0.540 |
MCP_0895 | MCP_2372 | Putative oxidoreductase. | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.548 |
MCP_1091 | MCP_2072 | Putative endonuclease IV. | Conserved hypothetical protein; Contains one Xylose isomerase-like TIM barrel domain (IPR012307). | 0.916 |
MCP_1262 | MCP_0765 | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Putative oxidoreductase. | 0.544 |
MCP_1262 | MCP_0852 | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Putative oxidoreductase. | 0.546 |
MCP_1262 | MCP_0895 | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Putative oxidoreductase. | 0.546 |
MCP_1262 | MCP_2072 | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Conserved hypothetical protein; Contains one Xylose isomerase-like TIM barrel domain (IPR012307). | 0.481 |
MCP_1262 | MCP_2372 | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.901 |
MCP_1345 | MCP_0765 | Putative carbohydrate kinase. | Putative oxidoreductase. | 0.413 |
MCP_1345 | MCP_0852 | Putative carbohydrate kinase. | Putative oxidoreductase. | 0.413 |
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