rpl11p protein (Methanocella paludicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

rpl11p

50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (160 aa)

Predicted Functional Partners:

rplX

0.999

rpl31e

0.999

rps19e

0.999

rps17e

0.999

rpl10e

0.999

rpl21e

0.999

rpl40e

0.999

rps3Ae

0.999

rpl24e

0.999

rps28e

0.999

Your Current Organism:

Methanocella paludicola

NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl10e	rpl11p	MCP_0368	MCP_2078	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	0.999
rpl10e	rpl21e	MCP_0368	MCP_0723	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.999
rpl10e	rpl24e	MCP_0368	MCP_1039	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl10e	rpl31e	MCP_0368	MCP_0012	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.999
rpl10e	rpl40e	MCP_0368	MCP_0806	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.999
rpl10e	rplX	MCP_0368	MCP_0010	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein LX.	0.999
rpl10e	rps17e	MCP_0368	MCP_0227	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rpl10e	rps19e	MCP_0368	MCP_0016	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rpl10e	rps28e	MCP_0368	MCP_1040	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl10e	rps3Ae	MCP_0368	MCP_0833	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rpl11p	rpl10e	MCP_2078	MCP_0368	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.	0.999
rpl11p	rpl21e	MCP_2078	MCP_0723	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.999
rpl11p	rpl24e	MCP_2078	MCP_1039	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	50S ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl11p	rpl31e	MCP_2078	MCP_0012	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	50S ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.999
rpl11p	rpl40e	MCP_2078	MCP_0806	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.999
rpl11p	rplX	MCP_2078	MCP_0010	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	50S ribosomal protein LX.	0.999
rpl11p	rps17e	MCP_2078	MCP_0227	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rpl11p	rps19e	MCP_2078	MCP_0016	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rpl11p	rps28e	MCP_2078	MCP_1040	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl11p	rps3Ae	MCP_2078	MCP_0833	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999

page 1 of 6

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About