STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2090Conserved hypothetical protein; Contains one Oxidoreductase, molybdopterin binding domain (IPR000572). (237 aa)    
Predicted Functional Partners:
MCP_2089
Hypothetical protein.
       0.800
MCP_2091
Hypothetical protein.
       0.678
MCP_2092
Hypothetical protein.
       0.517
fdhD
Protein FdhD homolog; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.465
moeA-2
Putative molybdopterin biosynthesis protein.
 
 
 
 0.453
MCP_2421
Molybdopterin-guanine dinucleotide biosynthesis MobB/molybdopterin biosynthesis MoaE; Bifunctional protein.
 
   
 0.439
moeA-1
Putative molybdopterin biosynthesis protein.
 
 
 
 0.434
MCP_2088
Hypothetical protein.
       0.425
moaA
Probable molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
 
   
 0.409
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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