STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2094Conserved hypothetical protein. (130 aa)    
Predicted Functional Partners:
MCP_2873
Putative universal stress protein.
   
    0.595
MCP_2304
Conserved hypothetical protein; Contains two CBS domains (IPR000644).
   
    0.403
MCP_0155
Putative universal stress protein.
   
    0.402
MCP_1491
Amino acid transporter.
   
    0.402
MCP_1802
Putative universal stress protein.
   
    0.402
MCP_1902
Putative universal stress protein.
   
    0.402
MCP_1948
Putative universal stress protein.
   
    0.402
MCP_2012
Putative universal stress protein.
   
    0.402
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.