STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2148Conserved hypothetical protein; Belongs to the Auxin efflux carrier family (IPR004776). (299 aa)    
Predicted Functional Partners:
MCP_0358
Peptidase M48, Ste24p family protein.
  
  
 0.671
htpX-1
Probable protease HtpX homolog; Belongs to the peptidase M48B family.
  
  
 0.671
htpX-2
Probable protease HtpX homolog; Belongs to the peptidase M48B family.
  
  
 0.671
coaD
Phosphopantetheine adenylyltransferase.
  
  
 0.670
MCP_2914
Conserved hypothetical protein; Contains two Sterol-sensing 5TM box domains (IPR000731); Contains one Calcium-binding EF-hand domain (IPR004869).; Contains one MMPL domain (IPR004869).
       0.569
MCP_2149
Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0132 family (IPR005348).
       0.558
MCP_1822
Putative purine phosphoribosyltransferase.
       0.529
MCP_2152
Putative K+-dependent Na+/Ca+ exchanger protein.
 
    0.476
MCP_2147
Hypothetical protein.
       0.444
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.