Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_2156TetR family transcriptional regulator. (211 aa)    
Predicted Functional Partners:
MCP_2915
TetR family transcriptional regulator.
  
     0.642
MCP_2157
Hypothetical protein; Contains at least one 4Fe-4S ferredoxin, iron-sulfur binding domain (IPR001450).
       0.625
MCP_0817
TetR family transcriptional regulator.
  
     0.609
MCP_0595
TetR family transcriptional regulator.
  
     0.608
MCP_2159
Similar to alpha-aminoadipate aminotransferase LysN in Thermus thermophilus (Q7X567).
     
 0.567
MCP_2314
TetR family transcriptional regulator.
  
     0.559
MCP_0597
TetR family transcriptional regulator.
  
     0.542
MCP_2158
Conserved hypothetical protein.
       0.522
MCP_2155
MFS transporter.
     
 0.512
MCP_2154
Amidohydrolase family protein.
 
   
 0.472
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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