Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0108 | MCP_2252 | MCP_0108 | MCP_2252 | Phosphate transporter. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | 0.839 |
MCP_2250 | MCP_2251 | MCP_2250 | MCP_2251 | Hypothetical protein. | Hypothetical protein. | 0.536 |
MCP_2250 | MCP_2252 | MCP_2250 | MCP_2252 | Hypothetical protein. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | 0.413 |
MCP_2251 | MCP_2250 | MCP_2251 | MCP_2250 | Hypothetical protein. | Hypothetical protein. | 0.536 |
MCP_2251 | MCP_2252 | MCP_2251 | MCP_2252 | Hypothetical protein. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | 0.578 |
MCP_2252 | MCP_0108 | MCP_2252 | MCP_0108 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | Phosphate transporter. | 0.839 |
MCP_2252 | MCP_2250 | MCP_2252 | MCP_2250 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | Hypothetical protein. | 0.413 |
MCP_2252 | MCP_2251 | MCP_2252 | MCP_2251 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | Hypothetical protein. | 0.578 |
MCP_2252 | prs-2 | MCP_2252 | MCP_2420 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P). | 0.427 |
prs-2 | MCP_2252 | MCP_2420 | MCP_2252 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P). | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF47 family (IPR002727). | 0.427 |