Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
MCP_2272Belongs to the Conserved hypothetical protein 268 family (IPR005232). (272 aa)    
Predicted Functional Partners:
MCP_2271
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF111 family (IPR002822).
  
 0.995
MCP_0138
CpmA homolog.
  
 0.989
MCP_2820
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF111 family (IPR002822).
 
  
 0.864
MCP_0283
Conserved hypothetical protein.
 
  
 0.805
MCP_1852
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF531 family (IPR007501).
       0.581
MCP_1085
Putative truncated cobalamin biosynthesis protein.
 
    0.530
mutS2
Putative DNA mismatch repair protein; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily.
       0.506
MCP_0796
Putative cobalamin biosynthesis protein.
  
    0.458
MCP_1086
Putative truncated cobalamin biosynthesis protein.
  
    0.458
MCP_1087
Conserved hypothetical protein.
  
    0.458
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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