STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2272Belongs to the Conserved hypothetical protein 268 family (IPR005232). (272 aa)    
Predicted Functional Partners:
MCP_2271
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF111 family (IPR002822).
  
 0.995
MCP_0138
CpmA homolog.
  
 0.986
MCP_0283
Conserved hypothetical protein.
 
  
 0.882
MCP_2820
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF111 family (IPR002822).
  
 0.864
MCP_1085
Putative truncated cobalamin biosynthesis protein.
 
    0.589
MCP_0796
Putative cobalamin biosynthesis protein.
  
    0.526
MCP_1086
Putative truncated cobalamin biosynthesis protein.
  
    0.526
MCP_1087
Conserved hypothetical protein.
  
    0.526
MCP_2668
Putative Na(+)/H(+) antiporter.
  
    0.409
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.