STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
MCP_2294Putative A-type ATP synthase subunit. (117 aa)    
Predicted Functional Partners:
atpC-2
A-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.962
atpD-2
A-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 0.925
atpB-2
A-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
 
 0.916
atpE-2
A-type ATP synthase subunit E.
  
 
  0.915
atpA-2
A-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
    
 0.914
atpH
A-type ATP synthase subunit H.
     
  0.900
atpI-2
A-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
  
    0.822
MCP_2295
Hypothetical protein.
       0.773
atpC-1
A-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.636
MCP_2296
Conserved hypothetical protein; Contains one Uncharacterized domain 2 (IPR004521).
       0.454
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.