Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MCP_2297Conserved hypothetical protein; Belongs to the Protein of unknown function DUF1621 family (IPR012426). (124 aa)    
Predicted Functional Partners:
MCP_2298
Conserved hypothetical protein; Contains one Zinc finger, ZPR1-type domain (IPR004457).
       0.879
MCP_2296
Conserved hypothetical protein; Contains one Uncharacterized domain 2 (IPR004521).
       0.805
MCP_1538
Conserved hypothetical protein.
  
    0.722
MCP_0020
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF1119, archaea family (IPR010545).
  
     0.695
MCP_0048
Conserved hypothetical protein.
  
     0.695
MCP_0003
Conserved hypothetical protein.
  
     0.691
MCP_2246
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF106, transmembrane family (IPR002809).
 
     0.689
MCP_2705
Putative oligosaccharyl transferase.
  
     0.681
MCP_2999
Putative signal sequence peptidase.
  
     0.677
MCP_0292
Conserved hypothetical protein.
  
     0.675
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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