STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2312CDP-alcohol phosphatidyltransferase family protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (204 aa)    
Predicted Functional Partners:
MCP_2313
Putative phosphatase, PHP family.
  
    0.783
MCP_2896
CDP-alcohol phosphatidyltransferase family protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.694
MCP_0592
CDP-alcohol phosphatidyltransferase family protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.685
MCP_2311
Nicotinamide-nucleotide adenylyltransferase.
 
     0.654
MCP_2314
TetR family transcriptional regulator.
       0.501
MCP_2315
Conserved hypothetical protein; Contains at least one Cysteine-rich region, CCG domain (IPR004017).
       0.486
MCP_1656
Molybdopterin binding, CinA-related family protein; Contains one Molybdopterin binding domain (IPR001453).
  
  
 0.481
pycA
Putative pyruvate carboxylase subunit A.
  
  
 0.463
MCP_1376
Putative TrmB family transcriptional regulator.
 
  
 0.450
MCP_1353
Hypothetical protein; Belongs to the Phosphoesterase, PA-phosphatase related family (IPR000326).
 
  
 0.437
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.