Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_2331 | MCP_2332 | MCP_2331 | MCP_2332 | Hypothetical protein. | Putative PadR-like family transcriptional regulator. | 0.456 |
MCP_2331 | MCP_2333 | MCP_2331 | MCP_2333 | Hypothetical protein. | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | 0.456 |
MCP_2331 | MCP_2334 | MCP_2331 | MCP_2334 | Hypothetical protein. | ABC transporter ATP binding protein. | 0.456 |
MCP_2331 | topA-1 | MCP_2331 | MCP_2330 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.613 |
MCP_2332 | MCP_2331 | MCP_2332 | MCP_2331 | Putative PadR-like family transcriptional regulator. | Hypothetical protein. | 0.456 |
MCP_2332 | MCP_2333 | MCP_2332 | MCP_2333 | Putative PadR-like family transcriptional regulator. | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | 0.782 |
MCP_2332 | MCP_2334 | MCP_2332 | MCP_2334 | Putative PadR-like family transcriptional regulator. | ABC transporter ATP binding protein. | 0.783 |
MCP_2332 | MCP_2335 | MCP_2332 | MCP_2335 | Putative PadR-like family transcriptional regulator. | Conserved hypothetical protein. | 0.563 |
MCP_2332 | MCP_2336 | MCP_2332 | MCP_2336 | Putative PadR-like family transcriptional regulator. | Conserved hypothetical protein. | 0.421 |
MCP_2333 | MCP_2331 | MCP_2333 | MCP_2331 | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | Hypothetical protein. | 0.456 |
MCP_2333 | MCP_2332 | MCP_2333 | MCP_2332 | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | Putative PadR-like family transcriptional regulator. | 0.782 |
MCP_2333 | MCP_2334 | MCP_2333 | MCP_2334 | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | ABC transporter ATP binding protein. | 0.990 |
MCP_2333 | MCP_2335 | MCP_2333 | MCP_2335 | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | Conserved hypothetical protein. | 0.564 |
MCP_2333 | MCP_2336 | MCP_2333 | MCP_2336 | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | Conserved hypothetical protein. | 0.421 |
MCP_2333 | MCP_2986 | MCP_2333 | MCP_2986 | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | ABC transporter ATP binding protein. | 0.961 |
MCP_2333 | topA-1 | MCP_2333 | MCP_2330 | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.479 |
MCP_2334 | MCP_2331 | MCP_2334 | MCP_2331 | ABC transporter ATP binding protein. | Hypothetical protein. | 0.456 |
MCP_2334 | MCP_2332 | MCP_2334 | MCP_2332 | ABC transporter ATP binding protein. | Putative PadR-like family transcriptional regulator. | 0.783 |
MCP_2334 | MCP_2333 | MCP_2334 | MCP_2333 | ABC transporter ATP binding protein. | Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). | 0.990 |
MCP_2334 | MCP_2335 | MCP_2334 | MCP_2335 | ABC transporter ATP binding protein. | Conserved hypothetical protein. | 0.563 |
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