Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_2366Histone acetyltransferase Elp3 homolog. (531 aa)    
Predicted Functional Partners:
MCP_2025
Conserved hypothetical protein; Belongs to the PP-loop ATPase, YdaO-related family (IPR012089).
   
 
 0.796
tuf
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
  
 
   0.791
MCP_0206
Conserved hypothetical protein; Belongs to the NMD3 family (IPR007064).
   
  
 0.750
MCP_0033
Putative 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
    
   0.738
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
   
 
 0.710
rps6e
30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
  
   0.684
MCP_1050
Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0113 family (IPR005155).
  
    0.660
prf1
Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
  
    0.658
MCP_0925
1-methylguanosine tRNA methyltransferase.
 
  
 0.635
MCP_0259
GTP-binding protein.
  
    0.623
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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