Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCP_0007 | MCP_2380 | Glucan 1,4-alpha-glucosidase. | Putative glycoside hydrolase. | 0.628 |
MCP_0007 | MCP_2383 | Glucan 1,4-alpha-glucosidase. | Putative amylo-alpha-1,6-glucosidase. | 0.546 |
MCP_0172 | MCP_2380 | Putative glycosyltransferase. | Putative glycoside hydrolase. | 0.626 |
MCP_0172 | MCP_2382 | Putative glycosyltransferase. | Putative glycosyltransferase. | 0.904 |
MCP_0172 | MCP_2383 | Putative glycosyltransferase. | Putative amylo-alpha-1,6-glucosidase. | 0.571 |
MCP_0286 | MCP_2380 | Conserved hypothetical protein; Belongs to the Amylo-alpha-1,6-glucosidase family (IPR010401). | Putative glycoside hydrolase. | 0.430 |
MCP_0654 | MCP_2380 | Conserved hypothetical protein. | Putative glycoside hydrolase. | 0.430 |
MCP_1265 | MCP_2380 | Conserved hypothetical protein; Belongs to the Amylo-alpha-1,6-glucosidase family (IPR010401). | Putative glycoside hydrolase. | 0.430 |
MCP_2380 | MCP_0007 | Putative glycoside hydrolase. | Glucan 1,4-alpha-glucosidase. | 0.628 |
MCP_2380 | MCP_0172 | Putative glycoside hydrolase. | Putative glycosyltransferase. | 0.626 |
MCP_2380 | MCP_0286 | Putative glycoside hydrolase. | Conserved hypothetical protein; Belongs to the Amylo-alpha-1,6-glucosidase family (IPR010401). | 0.430 |
MCP_2380 | MCP_0654 | Putative glycoside hydrolase. | Conserved hypothetical protein. | 0.430 |
MCP_2380 | MCP_1265 | Putative glycoside hydrolase. | Conserved hypothetical protein; Belongs to the Amylo-alpha-1,6-glucosidase family (IPR010401). | 0.430 |
MCP_2380 | MCP_2381 | Putative glycoside hydrolase. | Putative glycosyltransferase. | 0.921 |
MCP_2380 | MCP_2382 | Putative glycoside hydrolase. | Putative glycosyltransferase. | 0.911 |
MCP_2380 | MCP_2383 | Putative glycoside hydrolase. | Putative amylo-alpha-1,6-glucosidase. | 0.946 |
MCP_2380 | MCP_2384 | Putative glycoside hydrolase. | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | 0.588 |
MCP_2380 | MCP_2695 | Putative glycoside hydrolase. | Putative glycosyltransferase. | 0.674 |
MCP_2381 | MCP_2380 | Putative glycosyltransferase. | Putative glycoside hydrolase. | 0.921 |
MCP_2381 | MCP_2382 | Putative glycosyltransferase. | Putative glycosyltransferase. | 0.828 |
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