STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2380Putative glycoside hydrolase. (482 aa)    
Predicted Functional Partners:
MCP_2383
Putative amylo-alpha-1,6-glucosidase.
 
  
 0.946
MCP_2381
Putative glycosyltransferase.
 
    0.921
MCP_2382
Putative glycosyltransferase.
 
    0.911
MCP_2695
Putative glycosyltransferase.
 
    0.674
MCP_0007
Glucan 1,4-alpha-glucosidase.
 
  
 0.628
MCP_0172
Putative glycosyltransferase.
 
    0.626
MCP_2384
Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032).
       0.588
MCP_0286
Conserved hypothetical protein; Belongs to the Amylo-alpha-1,6-glucosidase family (IPR010401).
  
  
 0.430
MCP_0654
Conserved hypothetical protein.
  
  
 0.430
MCP_1265
Conserved hypothetical protein; Belongs to the Amylo-alpha-1,6-glucosidase family (IPR010401).
  
  
 0.430
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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