Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCP_0268 | MCP_2384 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF192 family (IPR003795). | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | 0.443 |
MCP_1208 | MCP_2384 | Hypothetical protein; Contains at least one WD-40 repeat (IPR001680). | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | 0.415 |
MCP_2380 | MCP_2381 | Putative glycoside hydrolase. | Putative glycosyltransferase. | 0.921 |
MCP_2380 | MCP_2382 | Putative glycoside hydrolase. | Putative glycosyltransferase. | 0.911 |
MCP_2380 | MCP_2383 | Putative glycoside hydrolase. | Putative amylo-alpha-1,6-glucosidase. | 0.946 |
MCP_2380 | MCP_2384 | Putative glycoside hydrolase. | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | 0.588 |
MCP_2381 | MCP_2380 | Putative glycosyltransferase. | Putative glycoside hydrolase. | 0.921 |
MCP_2381 | MCP_2382 | Putative glycosyltransferase. | Putative glycosyltransferase. | 0.828 |
MCP_2381 | MCP_2383 | Putative glycosyltransferase. | Putative amylo-alpha-1,6-glucosidase. | 0.905 |
MCP_2381 | MCP_2384 | Putative glycosyltransferase. | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | 0.592 |
MCP_2382 | MCP_2380 | Putative glycosyltransferase. | Putative glycoside hydrolase. | 0.911 |
MCP_2382 | MCP_2381 | Putative glycosyltransferase. | Putative glycosyltransferase. | 0.828 |
MCP_2382 | MCP_2383 | Putative glycosyltransferase. | Putative amylo-alpha-1,6-glucosidase. | 0.885 |
MCP_2382 | MCP_2384 | Putative glycosyltransferase. | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | 0.592 |
MCP_2383 | MCP_2380 | Putative amylo-alpha-1,6-glucosidase. | Putative glycoside hydrolase. | 0.946 |
MCP_2383 | MCP_2381 | Putative amylo-alpha-1,6-glucosidase. | Putative glycosyltransferase. | 0.905 |
MCP_2383 | MCP_2382 | Putative amylo-alpha-1,6-glucosidase. | Putative glycosyltransferase. | 0.885 |
MCP_2383 | MCP_2384 | Putative amylo-alpha-1,6-glucosidase. | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | 0.588 |
MCP_2384 | MCP_0268 | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF192 family (IPR003795). | 0.443 |
MCP_2384 | MCP_1208 | Hypothetical protein; Contains one TrkA-Ndomain (IPR003148); Contains one Ryanodine receptor Ryr domain (IPR003032). | Hypothetical protein; Contains at least one WD-40 repeat (IPR001680). | 0.415 |
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