Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_2404Conserved hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216). (267 aa)    
Predicted Functional Partners:
MCP_2781
Putative methyltransferase.
 
   
 0.681
MCP_2403
Purine nucleoside phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
       0.671
MCP_0823
Conserved hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216).
 
   
 0.668
MCP_2405
Putative carbonic anhydrase.
       0.527
MCP_2179
Conserved hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216).
 
   
 0.521
fdhB-2
Formate dehydrogenase beta chain.
       0.448
fdhA-2
Formate dehydrogenase alpha chain.
       0.448
MCP_0974
Hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216).
  
     0.412
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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