STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csdPutative cysteine desulfurase. (393 aa)    
Predicted Functional Partners:
MCP_0409
Putative iron sulfur cluster assembly protein.
  
 
 0.999
MCP_0411
ABC transporter ATP binding protein.
  
 0.999
MCP_0410
Putative ABC transporter; Belongs to the SufBD family (IPR000825).
 
 0.998
trxB-2
Putative thioredoxin reductase.
 
 
 0.933
trxB-3
Putative thioredoxin reductase.
 
 
 0.933
MCP_0101
Conserved hypothetical protein; Belongs to the HesB/YadR/YfhF family (IPR000361).
  
 
 0.691
MCP_2432
Conserved hypothetical protein.
       0.641
MCP_2434
Conserved hypothetical protein.
     
 0.635
MCP_2435
Conserved hypothetical protein.
       0.625
moaA
Probable molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
   
 
 0.516
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.