STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2489Hypothetical protein. (393 aa)    
Predicted Functional Partners:
MCP_2490
Conserved hypothetical protein.
       0.773
MCP_2488
Conserved hypothetical protein.
       0.768
MCP_2487
Cell division ATPase MinD.
       0.751
MCP_2491
Conserved hypothetical protein; Belongs to the Roadblock/LC7 family (IPR004942).
       0.729
mvhA-1
F420-non-reducing hydrogenase subunit A; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
       0.705
mvhG-1
F420-non-reducing hydrogenase subunit G.
       0.705
MCP_2494
Conserved hypothetical protein.
       0.705
MCP_2495
Ferredoxin.
       0.705
MCP_2486
Conserved hypothetical protein.
       0.635
MCP_2485
Conserved hypothetical protein; Contains one Serine/threonine protein kinase domain (IPR002290).
       0.483
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.