Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2499Conserved hypothetical protein. (151 aa)    
Predicted Functional Partners:
MCP_2500
Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0153 family (IPR005358).
   
   0.560
MCP_2501
Hypothetical protein; Contains one Zinc finger, AN1-type domain (IPR000058).
       0.500
MCP_1384
Conserved hypothetical protein.
  
     0.490
MCP_2897
Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576).
  
     0.464
MCP_0630
Conserved hypothetical protein.
  
     0.438
MCP_2060
Conserved hypothetical protein.
  
     0.421
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.