Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCP_0985 | MCP_2512 | Putative ABC transporter. | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.642 |
MCP_0992 | MCP_2512 | Putative ABC transporter. | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.642 |
MCP_1195 | MCP_1365 | ABC transporter permease protein. | ABC transporter permease protein. | 0.413 |
MCP_1195 | MCP_2512 | ABC transporter permease protein. | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.659 |
MCP_1195 | MCP_2632 | ABC transporter permease protein. | ABC transporter permease protein. | 0.465 |
MCP_1202 | MCP_2512 | Putative ABC transporter. | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.642 |
MCP_1236 | MCP_2512 | Putative ABC transporter. | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.642 |
MCP_1241 | MCP_2512 | Putative ABC transporter. | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.642 |
MCP_1365 | MCP_1195 | ABC transporter permease protein. | ABC transporter permease protein. | 0.413 |
MCP_1365 | MCP_2511 | ABC transporter permease protein. | ABC transporter permease protein; Similar to Nodulation protein J in Rhizobium sp. (strain N33) (P72336). | 0.497 |
MCP_1365 | MCP_2512 | ABC transporter permease protein. | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.642 |
MCP_1365 | MCP_2632 | ABC transporter permease protein. | ABC transporter permease protein. | 0.462 |
MCP_2511 | MCP_1365 | ABC transporter permease protein; Similar to Nodulation protein J in Rhizobium sp. (strain N33) (P72336). | ABC transporter permease protein. | 0.497 |
MCP_2511 | MCP_2512 | ABC transporter permease protein; Similar to Nodulation protein J in Rhizobium sp. (strain N33) (P72336). | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | 0.988 |
MCP_2511 | MCP_2632 | ABC transporter permease protein; Similar to Nodulation protein J in Rhizobium sp. (strain N33) (P72336). | ABC transporter permease protein. | 0.469 |
MCP_2512 | MCP_0985 | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | Putative ABC transporter. | 0.642 |
MCP_2512 | MCP_0992 | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | Putative ABC transporter. | 0.642 |
MCP_2512 | MCP_1195 | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | ABC transporter permease protein. | 0.659 |
MCP_2512 | MCP_1202 | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | Putative ABC transporter. | 0.642 |
MCP_2512 | MCP_1236 | Similar to Nod factor export ATP-binding protein I in Rhizobium sp. (strain N33) (P72335). | Putative ABC transporter. | 0.642 |
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