STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2523ABC transporter ATP binding protein. (256 aa)    
Predicted Functional Partners:
MCP_2522
ABC transporter permease protein.
  
 0.998
MCP_2521
Putative ABC transporter substrate binding protein; Contains one Twin-arginine translocation pathway signal domain (IPR006311).
 
  
 0.970
MCP_2984
Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838).
     0.913
MCP_2983
Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838).
     0.912
MCP_1758
ABC transporter substrate binding protein.
 
  
 0.900
MCP_1633
ABC transporter ATP binding protein.
   
0.877
MCP_1242
ABC transporter ATP binding protein.
    
0.860
MCP_1240
ABC transporter ATP binding protein.
    
0.857
MCP_0401
Putative ABC transporter.
 
  
 0.831
MCP_1562
Putative peptide ABC transporter permease protein.
    
 0.808
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (28%) [HD]