STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2566Hypothetical protein. (140 aa)    
Predicted Functional Partners:
MCP_2565
Hypothetical protein.
       0.869
MCP_2569
Conserved hypothetical protein.
       0.789
MCP_2567
Conserved hypothetical protein.
       0.773
MCP_2572
Putative bacterial type II secretion system protein.
       0.773
MCP_2568
Conserved hypothetical protein.
       0.768
MCP_2570
Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992).
       0.768
MCP_2571
Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992).
       0.768
comB
Putative 2-phosphosulfolactate phosphatase.
       0.642
MCP_2573
Hypothetical protein.
       0.543
MCP_2972
Putative bacterial type II secretion system protein.
       0.417
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.