STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2598NADH oxidase. (451 aa)    
Predicted Functional Partners:
MCP_1732
Sulfite reductase.
   
 0.941
fdhA-1
Formate dehydrogenase alpha chain.
    
 0.921
fdhA-2
Formate dehydrogenase alpha chain.
    
 0.921
fprA
F420H2 oxidase.
    
 0.920
MCP_0233
Similar to peptide synthetase AdpD in Anabaena circinalis 90 (Q9K5L9).
  
 
 0.858
MCP_0975
Conserved hypothetical protein; Contains one Rieske [2Fe-2S] region domain (IPR005806).
 
 
 0.852
MCP_0385
Conserved hypothetical protein; Contains one Rieske [2Fe-2S] regiondomain (IPR005806).
 
 
 0.847
MCP_0978
Conserved hypothetical protein; Contains one Rieske [2Fe-2S] region domain (IPR005806).
  
 
 0.821
rps5p
30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.
  
 
 0.777
MCP_2599
Conserved hypothetical protein.
       0.773
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.