STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2665ABC transporter permease protein. (303 aa)    
Predicted Functional Partners:
MCP_2804
ABC transporter permease protein.
 
  
 0.967
MCP_2805
ABC transporter ATP binding protein.
 
  
  0.867
MCP_0618
Tungsten-containing aldehyde ferredoxin oxidoreductase.
 
   
 0.733
MCP_0658
Tungsten-containing aldehyde ferredoxin oxidoreductase.
 
   
 0.729
moeA-1
Putative molybdopterin biosynthesis protein.
 
   
 0.713
MCP_2664
Aspartate/glutamate/uridylate kinase.
       0.555
MCP_1863
Molybdate ABC transporter molybdate binding protein precursor.
     
 0.507
MCP_0617
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
     0.502
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
 0.490
MCP_2663
Conserved hypothetical protein.
       0.418
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.