Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MCP_2687Putative acylphosphatase. (88 aa)    
Predicted Functional Partners:
MCP_0939
Putative amidase.
    
 0.911
acsA
acetyl-CoA synthetase.
    
 0.908
MCP_0935
Putative acyl-CoA synthetase.
    
 0.908
acdB
acetyl-CoA synthetase beta subunit.
    
 0.901
acdA
acetyl-CoA synthetase alpha subunit.
    
 0.901
MCP_2918
acetyl-CoA synthetase.
    
 0.901
gap-2
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.748
MCP_2689
Hypothetical protein.
       0.550
MCP_0087
CutA homolog.
       0.536
MCP_1946
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF99 family (IPR002802).
       0.536
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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