STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2725Conserved hypothetical protein; Contains one Radical SAMdomain (IPR007197). (422 aa)    
Predicted Functional Partners:
MCP_2726
Conserved hypothetical protein.
       0.800
MCP_2727
Conserved hypothetical protein.
       0.773
MCP_2728
Phosphatidate cytidylyltransferase family protein.
       0.652
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
     
 0.651
MCP_2730
Putative HTH-type transcriptional regulator.
     
 0.466
MCP_2731
Hypothetical protein.
       0.452
MCP_2737
Conserved hypothetical protein.
  
     0.448
MCP_0927
Putative cell surface protein; Contains seven 40-residue YVTN beta-propeller repeats (IPR011964).
 
  
 0.445
MCP_0558
Conserved hypothetical protein; Contains one 40-residue YVTN beta-propeller repeat (IPR011964).
 
  
 0.400
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.