STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2744Putative amino acid ABC transporter ATP binding protein. (241 aa)    
Predicted Functional Partners:
MCP_2743
Putative amino acid ABC transporter permease protein; Contains one PEGA domain (IPR013229).
 
 0.999
MCP_2742
Putative amino acid ABC transporter amino acid binding protein.
 
 0.955
MCP_1562
Putative peptide ABC transporter permease protein.
    
 0.928
MCP_2984
Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838).
    0.915
MCP_2983
Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838).
    0.914
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.679
MCP_0440
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.583
MCP_1905
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.583
MCP_2522
ABC transporter permease protein.
  
 0.496
argH
Argininosuccinate lyase.
 
  
 0.493
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.