STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2748acyl-CoA C-acyltransferases. (392 aa)    
Predicted Functional Partners:
MCP_2747
Putative hydroxymethylglutaryl-coenzyme A synthase; Belongs to the thiolase-like superfamily. UPF0219 family.
 
 0.999
MCP_2749
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF35 family (IPR002878).
 
 
 0.999
MCP_0935
Putative acyl-CoA synthetase.
  
 
 0.964
acsA
acetyl-CoA synthetase.
  
 
 0.963
pdhC
Pyruvate dehydrogenase E2 component.
  
 
 0.949
aksA
Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.945
MCP_2808
Putative 2-isopropylmalate synthase.
  
 
 0.945
MCP_2918
acetyl-CoA synthetase.
  
 
 0.944
acdA
acetyl-CoA synthetase alpha subunit.
  
 
 0.928
acdB
acetyl-CoA synthetase beta subunit.
  
 
 0.926
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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