STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fwdD-2Tungsten-containing formylmethanofuran dehydrogenase subunit D. (137 aa)    
Predicted Functional Partners:
fwdA-2
Tungsten-containing formylmethanofuran dehydrogenase subunit A.
 
 
 0.986
fwdF-2
Tungsten-containing formylmethanofuran dehydrogenase subunit F.
 
 
 0.985
fwdB-2
Tungsten-containing formylmethanofuran dehydrogenase subunit B.
 
 
 
 0.984
fwdG-2
Tungsten-containing formylmethanofuran dehydrogenase subunit G.
 
 
 0.968
fwdF-1
Tungsten-containing formylmethanofuran dehydrogenase subunit F.
 
 
 0.958
fwdC-2
Tungsten-containing formylmethanofuran dehydrogenase subunit C.
 
  
 0.949
fwdA-1
Tungsten-containing formylmethanofuran dehydrogenase subunit A.
 
 
 0.944
fwdB-1
Tungsten-containing formylmethanofuran dehydrogenase subunit B.
 
 
 
 0.935
hdrA-2
CoB--CoM heterodisulfide reductase iron-sulfur subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
  
 
 0.925
hdrB-3
CoB--CoM heterodisulfide reductase subunit B.
 
 
 
 0.924
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.