STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdrB-3CoB--CoM heterodisulfide reductase subunit B. (303 aa)    
Predicted Functional Partners:
hdrC-3
CoB--CoM heterodisulfide reductase iron-sulfur subunit C.
 
 
 0.986
hdrA-2
CoB--CoM heterodisulfide reductase iron-sulfur subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.985
mvhD-2
F420-non-reducing hydrogenase iron-sulfur subunit D.
 
 
 0.980
hdrC-1
CoB--CoM heterodisulfide reductase iron-sulfur subunit C.
 
 
 0.943
fwdF-2
Tungsten-containing formylmethanofuran dehydrogenase subunit F.
 
 
 
 0.942
hdrA-1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.940
fwdD-2
Tungsten-containing formylmethanofuran dehydrogenase subunit D.
 
 
 
 0.935
hdrA/mvhD
CoB--CoM heterodisulfide reductase iron-sulfur subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 
 0.932
fwdG-2
Tungsten-containing formylmethanofuran dehydrogenase subunit G.
   
 
 0.927
fwdB-2
Tungsten-containing formylmethanofuran dehydrogenase subunit B.
 
 
 0.920
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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