STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2810Putative phosphoesterase. (312 aa)    
Predicted Functional Partners:
MCP_2811
Conserved hypothetical protein; Contains one Histidine biosynthesis domain (IPR006062); Belongs to the HisA/HisF family.
 
     0.800
MCP_2812
Conserved hypothetical protein; Contains one Cytochrome c biogenesis protein, transmembrane region domain (IPR003834).
 
     0.630
MCP_1358
Putative phosphoadenosine phosphosulfate reductase.
 
    0.550
MCP_0638
Putative phosphoadenosine phosphosulfate reductase.
 
    0.543
infB
Probable translation initiation factor 2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
  
  
 0.481
MCP_0112
Conserved hypothetical protein; Contains one TOPRIM domain (IPR006171); Belongs to the UPF0292 family.
 
   
 0.476
MCP_0019
Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0147 family (IPR005354).
  
     0.446
MCP_1819
Conserved hypothetical protein; Contains one Radical SAMdomain (IPR007197).
  
     0.437
MCP_2746
Putative HTH-type transcriptional regulator.
  
     0.435
MCP_2813
Hypothetical protein.
       0.412
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.