Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nrdGPutative anaerobic ribonucleoside-triphosphate reductase-activating protein. (255 aa)    
Predicted Functional Partners:
nrdD
Anaerobic ribonucleoside-triphosphate reductase.
 
  
 0.952
MCP_2831
Conserved hypothetical protein; Contains one Adenylate/cytidine kinase, N-terminal domain (IPR011769); Belongs to the Protein of unknown function DUF54 family (IPR002739).
       0.574
hisC
Histidinol-phosphate aminotransferase.
 
  
 0.569
MCP_1732
Sulfite reductase.
  
  
 0.499
moaA
Probable molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
  
  
 0.471
MCP_1808
Conserved hypothetical protein; Contains one Radical SAM domain (IPR007197); Similar to Pyruvate formate lyase activating protein homologue in Thermococcus litoralis (Q56302).
     
 0.453
MCP_1919
L-lysine 2,3-aminomutase.
      
 0.447
MCP_0385
Conserved hypothetical protein; Contains one Rieske [2Fe-2S] regiondomain (IPR005806).
 
  
 0.431
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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