STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2832Conserved hypothetical protein; Contains one Xylose isomerase-like TIM barrel domain (IPR012307). (256 aa)    
Predicted Functional Partners:
MCP_2831
Conserved hypothetical protein; Contains one Adenylate/cytidine kinase, N-terminal domain (IPR011769); Belongs to the Protein of unknown function DUF54 family (IPR002739).
  
    0.905
MCP_2834
MFS transporter; Similar to Fosmidomycin resistance protein in Escherichia coli (P52067).
 
    0.810
MCP_2833
MFS transporter; Similar to Fosmidomycin resistance protein in Escherichia coli (P52067).
 
    0.805
MCP_2830
Conserved hypothetical protein.
       0.526
MCP_0267
Conserved hypothetical protein; Contains one Phosphate acetyl/butaryl transferase domain (IPR002505); Similar to Putative methyltransferase mtx subunit X in Methanosarcina barkeri (strain Fusaro / DSM 804) (O32853).
  
     0.474
MCP_0363
Conserved hypothetical protein.
 
   
 0.432
MCP_2619
Putative phosphatase, PHP family.
 
     0.422
atw-2
Putative methylcoenzyme M reductase system component A2.
 
     0.415
atw-1
Putative methylcoenzyme M reductase system component A2.
 
     0.408
MCP_0362
Conserved hypothetical protein.
 
     0.403
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.