Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2939Di-trans-poly-cis-decaprenylcistransferase family protein. (213 aa)    
Predicted Functional Partners:
MCP_0056
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.977
MCP_2437
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.968
MCP_0139
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.952
MCP_2938
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF92, transmembrane family (IPR002794).
     
 0.798
MCP_2940
Belongs to the Conserved hypothetical protein 374 family (IPR005242).
     
 0.740
nusA
NusA protein homolog; Participates in transcription termination. Belongs to the NusA family.
  
    0.704
pyrH
Probable uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.626
MCP_2369
GTP-binding protein.
  
    0.623
mobA
Probable molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
     
 0.606
MCP_0088
Peptidase M50 family protein.
 
  
 0.586
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (18%) [HD]