STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_2940Belongs to the Conserved hypothetical protein 374 family (IPR005242). (343 aa)    
Predicted Functional Partners:
MCP_2939
Di-trans-poly-cis-decaprenylcistransferase family protein.
     
 0.758
MCP_1376
Putative TrmB family transcriptional regulator.
  
  
 0.599
MCP_2938
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF92, transmembrane family (IPR002794).
 
     0.585
MCP_0244
Hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216); Contains two Glycosyl transferase, family 2 domains (IPR001173).
 
  
 0.571
MCP_2941
Conserved hypothetical protein; Contains one Protein of unknown function DUF151 domain (IPR003729).
       0.544
MCP_0949
Hypothetical protein; Contains one UDP-glucose/GDP-mannose dehydrogenase domain (IPR001732); Contains one Glycosyl transferase, family 2 domain (IPR001173).
     
 0.525
MCP_2914
Conserved hypothetical protein; Contains two Sterol-sensing 5TM box domains (IPR000731); Contains one Calcium-binding EF-hand domain (IPR004869).; Contains one MMPL domain (IPR004869).
     
 0.525
mobA
Probable molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
       0.504
MCP_1078
ABC transporter substrate binding protein.
 
    0.489
MCP_1586
Conserved hypothetical protein.
 
    0.459
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.