Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_1328 | MCP_2778 | MCP_1328 | MCP_2778 | Putative bacterial type II secretion system protein. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF112, transmembrane family (IPR002823). | 0.443 |
MCP_1328 | MCP_2972 | MCP_1328 | MCP_2972 | Putative bacterial type II secretion system protein. | Putative bacterial type II secretion system protein. | 0.649 |
MCP_2570 | MCP_2571 | MCP_2570 | MCP_2571 | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | 0.925 |
MCP_2570 | MCP_2778 | MCP_2570 | MCP_2778 | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF112, transmembrane family (IPR002823). | 0.465 |
MCP_2570 | MCP_2972 | MCP_2570 | MCP_2972 | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | Putative bacterial type II secretion system protein. | 0.741 |
MCP_2571 | MCP_2570 | MCP_2571 | MCP_2570 | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | 0.925 |
MCP_2571 | MCP_2972 | MCP_2571 | MCP_2972 | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | Putative bacterial type II secretion system protein. | 0.710 |
MCP_2778 | MCP_1328 | MCP_2778 | MCP_1328 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF112, transmembrane family (IPR002823). | Putative bacterial type II secretion system protein. | 0.443 |
MCP_2778 | MCP_2570 | MCP_2778 | MCP_2570 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF112, transmembrane family (IPR002823). | Conserved hypothetical protein; Belongs to the Bacterial type II secretion system protein family (IPR001992). | 0.465 |
MCP_2778 | MCP_2972 | MCP_2778 | MCP_2972 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF112, transmembrane family (IPR002823). | Putative bacterial type II secretion system protein. | 0.533 |
MCP_2968 | MCP_2969 | MCP_2968 | MCP_2969 | Hypothetical protein. | Conserved hypothetical protein. | 0.756 |
MCP_2968 | MCP_2970 | MCP_2968 | MCP_2970 | Hypothetical protein. | Putative phosphoribosyltransferase. | 0.635 |
MCP_2968 | MCP_2972 | MCP_2968 | MCP_2972 | Hypothetical protein. | Putative bacterial type II secretion system protein. | 0.566 |
MCP_2968 | MCP_2973 | MCP_2968 | MCP_2973 | Hypothetical protein. | Conserved hypothetical protein. | 0.446 |
MCP_2968 | pfpI | MCP_2968 | MCP_2971 | Hypothetical protein. | Intracellular protease 1. | 0.638 |
MCP_2969 | MCP_2968 | MCP_2969 | MCP_2968 | Conserved hypothetical protein. | Hypothetical protein. | 0.756 |
MCP_2969 | MCP_2970 | MCP_2969 | MCP_2970 | Conserved hypothetical protein. | Putative phosphoribosyltransferase. | 0.652 |
MCP_2969 | MCP_2972 | MCP_2969 | MCP_2972 | Conserved hypothetical protein. | Putative bacterial type II secretion system protein. | 0.722 |
MCP_2969 | MCP_2973 | MCP_2969 | MCP_2973 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.461 |
MCP_2969 | pfpI | MCP_2969 | MCP_2971 | Conserved hypothetical protein. | Intracellular protease 1. | 0.655 |
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