Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_2984Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838). (402 aa)    
Predicted Functional Partners:
MCP_2986
ABC transporter ATP binding protein.
 
 0.997
MCP_2334
ABC transporter ATP binding protein.
 
 0.991
MCP_1083
Putative cobalt ABC transporter ATP binding protein.
     0.914
MCP_2744
Putative amino acid ABC transporter ATP binding protein.
     0.914
MCP_2523
ABC transporter ATP binding protein.
     0.912
MCP_2805
ABC transporter ATP binding protein.
     0.912
MCP_1847
ABC transporter ATP binding protein.
   
 0.908
MCP_1366
ABC transporter ATP binding protein.
    
 0.881
MCP_2985
Conserved hypothetical protein.
       0.778
MCP_2983
Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838).
 
    
0.777
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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