Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC112949861Hepatocyte nuclear factor 4-beta-like. (453 aa)    
Predicted Functional Partners:
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
 0.809
PPARGC1A
PPARG coactivator 1 alpha.
    
 
 0.798
CTNNB1
Catenin beta 1.
    
 
 0.768
MED1
Mediator complex subunit 1.
    
  0.724
HNF1A
HNF1 homeobox A.
   
 0.632
HNF1B
HNF1 homeobox B.
   
 0.577
RPL9
Ribosomal protein L9.
    
  0.577
TRABD
TraB domain containing.
      
 0.555
JUP
Junction plakoglobin.
    
 
 0.536
SIRT1
Sirtuin 1.
    
 
 0.535
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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