MAEA protein (Nothoprocta perdicaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MAEA

Macrophage erythroblast attacher. (396 aa)

Predicted Functional Partners:

MKLN1

0.997

WDR26

0.995

GID8

0.995

RMND5A

0.994

ENSNPEP00000000822

0.992

ENSNPEP00000000850

0.992

ENSNPEP00000001064

0.987

GID4

0.986

RANBP10

0.961

RANBP9

0.961

Your Current Organism:

Nothoprocta perdicaria

NCBI taxonomy Id: 30464
Other names: N. perdicaria

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNPEP00000000822	ENSNPEP00000000850	ENSNPEP00000000822	ENSNPEP00000000850	annotation not available	annotation not available	0.971
ENSNPEP00000000822	ENSNPEP00000001064	ENSNPEP00000000822	ENSNPEP00000001064	annotation not available	annotation not available	0.954
ENSNPEP00000000822	GID4	ENSNPEP00000000822	ENSNPEP00000019442	annotation not available	GID complex subunit 4 homolog.	0.992
ENSNPEP00000000822	GID8	ENSNPEP00000000822	ENSNPEP00000012851	annotation not available	GID complex subunit 8 homolog.	0.977
ENSNPEP00000000822	MAEA	ENSNPEP00000000822	ENSNPEP00000001552	annotation not available	Macrophage erythroblast attacher.	0.992
ENSNPEP00000000822	MKLN1	ENSNPEP00000000822	ENSNPEP00000002874	annotation not available	Muskelin 1.	0.977
ENSNPEP00000000822	RANBP10	ENSNPEP00000000822	ENSNPEP00000010445	annotation not available	RAN binding protein 10.	0.906
ENSNPEP00000000822	RANBP9	ENSNPEP00000000822	ENSNPEP00000020947	annotation not available	RAN binding protein 9.	0.906
ENSNPEP00000000822	RMND5A	ENSNPEP00000000822	ENSNPEP00000001063	annotation not available	Required for meiotic nuclear division 5 homolog A.	0.977
ENSNPEP00000000822	WDR26	ENSNPEP00000000822	ENSNPEP00000002933	annotation not available	WD repeat domain 26.	0.991
ENSNPEP00000000850	ENSNPEP00000000822	ENSNPEP00000000850	ENSNPEP00000000822	annotation not available	annotation not available	0.971
ENSNPEP00000000850	ENSNPEP00000001064	ENSNPEP00000000850	ENSNPEP00000001064	annotation not available	annotation not available	0.954
ENSNPEP00000000850	GID4	ENSNPEP00000000850	ENSNPEP00000019442	annotation not available	GID complex subunit 4 homolog.	0.992
ENSNPEP00000000850	GID8	ENSNPEP00000000850	ENSNPEP00000012851	annotation not available	GID complex subunit 8 homolog.	0.977
ENSNPEP00000000850	MAEA	ENSNPEP00000000850	ENSNPEP00000001552	annotation not available	Macrophage erythroblast attacher.	0.992
ENSNPEP00000000850	MKLN1	ENSNPEP00000000850	ENSNPEP00000002874	annotation not available	Muskelin 1.	0.977
ENSNPEP00000000850	RANBP10	ENSNPEP00000000850	ENSNPEP00000010445	annotation not available	RAN binding protein 10.	0.906
ENSNPEP00000000850	RANBP9	ENSNPEP00000000850	ENSNPEP00000020947	annotation not available	RAN binding protein 9.	0.906
ENSNPEP00000000850	RMND5A	ENSNPEP00000000850	ENSNPEP00000001063	annotation not available	Required for meiotic nuclear division 5 homolog A.	0.977
ENSNPEP00000000850	WDR26	ENSNPEP00000000850	ENSNPEP00000002933	annotation not available	WD repeat domain 26.	0.991