Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNPEP00000001686annotation not available (79 aa)    
Predicted Functional Partners:
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.997
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.997
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.997
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.997
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.997
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
   
 0.994
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.988
ENSNPEP00000005865
annotation not available
   
 0.987
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.982
SF3B5
Splicing factor 3b subunit 5.
   
 0.982
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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