STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB15Ankyrin repeat and SOCS box containing 15. (283 aa)    
Predicted Functional Partners:
COMMD8
COMM domain containing 8.
    
  0.684
TTC30B
Tetratricopeptide repeat domain 30B.
    
 0.655
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.647
COMMD4
COMM domain containing 4.
    
 0.629
TRAF7
TNF receptor associated factor 7.
    
 0.629
REL
REL proto-oncogene, NF-kB subunit.
   
 0.627
COMMD2
COMM domain containing 2.
    
  0.622
COMMD9
COMM domain containing 9.
    
  0.622
LOC112947016
COMM domain-containing protein 5-like.
    
  0.611
RPS3
Ribosomal protein S3.
    
 0.598
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.