Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC112954182Keratin, type II cytoskeletal 4-like. (609 aa)    
Predicted Functional Partners:
DSG2
Desmoglein 2.
    
  0.804
ENSNPEP00000009731
annotation not available
    
  0.804
ENSNPEP00000005410
annotation not available
    
 
 0.776
BANF1
Barrier to autointegration factor 2.
    
 0.648
RBM39
RNA binding motif protein 39.
    
 0.599
LEMD3
LEM domain containing 3.
    
 0.599
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.516
ENSNPEP00000012112
annotation not available
    
 0.516
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.516
EEF1A2
Eukaryotic translation elongation factor 1 alpha 2.
   
 
 0.511
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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