Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNL1Cyclin L1. (519 aa)    
Predicted Functional Partners:
LOC112957352
Cyclin-dependent kinase 11B.
   
 
 0.981
CCNL2
Cyclin L2.
   
   0.954
SAP30BP
SAP30 binding protein.
    
   0.946
ILF3
Interleukin enhancer binding factor 3.
    
   0.899
GPATCH2
G-patch domain containing 2.
   
   0.836
PRPF40A
pre-mRNA processing factor 40 homolog A.
   
   0.813
ENSNPEP00000002887
annotation not available
   
 
 0.784
CDK10
Cyclin dependent kinase 10.
   
 
 0.784
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H1.
   
 
 0.784
ELAVL1
ELAV like RNA binding protein 1.
   
 
 0.783
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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