STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN3PDZ domain containing ring finger 3. (1059 aa)    
Predicted Functional Partners:
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.882
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.875
ENSNPEP00000017086
annotation not available
    
 0.852
RPS27A
Ribosomal protein S27a.
    
 0.850
RNASEL
Ribonuclease L.
    
 0.847
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.798
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
    
 0.784
TRADD
TNFRSF1A associated via death domain.
    
 0.759
LOC112953205
2'-5'-oligoadenylate synthase 1-like.
    
 0.747
OPTN
Optineurin.
    
 0.723
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.