STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHQ1SHQ1, H/ACA ribonucleoprotein assembly factor. (518 aa)    
Predicted Functional Partners:
LOC112956274
H/ACA ribonucleoprotein complex subunit DKC1.
   
 0.938
LOC112956272
H/ACA ribonucleoprotein complex subunit DKC1.
   
 0.938
GAR1
GAR1 ribonucleoprotein.
   
 
 0.926
TRUB1
TruB pseudouridine synthase family member 1.
   
 0.903
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.889
NOP10
NOP10 ribonucleoprotein.
   
 
 0.873
RUVBL1
RuvB like AAA ATPase 1.
    
 
 0.633
NOP58
NOP58 ribonucleoprotein.
   
 
 0.523
TBCCD1
TBCC domain containing 1.
   
    0.508
SNU13
Small nuclear ribonucleoprotein 13.
   
 
 0.491
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.